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  • Introduction
  • Your Genome: Mostly Mobile Elements and their remains
  • Mobile Elements of the Human Genome
  • Challenge: Identify all polymorphic LINE-1
  • Identifying Mobile Element Insertions in Whole-Genome Paired-Read Sequence
  • Mobile-Element Scanning (ME-Scan) Library prep for PacBio sequencing
  • ME-Scan with PacBio Sequencing
  • Bioinformatics: Identifying LINE-1 insertions from CCS data
  • Yield of Mapped, indexed CCS per Pooled Individual (58,612 total)
  • Accuracy of LINE-1 Insertion Position Estimation
  • Sensitivity of LINE-1 Detection
  • What elements did we retrieve?
  • Novel and known Mobile Element Polymorphisms Retrieved
  • Conclusions & Future Directions
  • What elements did we retrieve?
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  • Current Speaker: David J. Witherspoon, PhD / University of Utah
  • Current Speaker: David J. Witherspoon, PhD / University of Utah
  • Current Speaker: David J. Witherspoon, PhD / University of Utah
  • Current Speaker: David J. Witherspoon, PhD / University of Utah
  • Current Speaker: David J. Witherspoon, PhD / University of Utah
  • Current Speaker: David J. Witherspoon, PhD / University of Utah
  • Current Speaker: David J. Witherspoon, PhD / University of Utah
  • Current Speaker: David J. Witherspoon, PhD / University of Utah
  • Current Speaker: David J. Witherspoon, PhD / University of Utah
  • Current Speaker: David J. Witherspoon, PhD / University of Utah
  • Current Speaker: David J. Witherspoon, PhD / University of Utah
  • Current Speaker: David J. Witherspoon, PhD / University of Utah
  • Current Speaker: David J. Witherspoon, PhD / University of Utah
  • Current Speaker: David J. Witherspoon, PhD / University of Utah
  • Current Speaker: David J. Witherspoon, PhD / University of Utah